| 2024-02 |
Personalized Biomarker-Based Umbrella Trial for Patients With Recurrent or Metastatic Head and Neck Squamous Cell Carcinoma: KCSG HN 15-16 TRIUMPH Trial |
Journal of Clinical Oncology
|
| 2024-01 |
Immunological subtyping of salivary gland cancer identifies histological origin-specific tumor immune microenvironment |
Npj Precision Oncology
|
| 2023-12 |
Comprehensive benchmarking and guidelines of mosaic variant calling strategies
|
Nature Methods
|
| 2023-10 |
CanISO: a database of genomic and transcriptomic variations in domestic dog (Canis lupus familiaris) |
BMC Genomics
|
| 2023-09 |
Copy number aberrations in circulating tumor DNA enables prognosis prediction and molecular characterization of breast cancer |
Journal of the National Cancer Institute
|
| 2023-08 |
Detecting Low-Variant Allele Frequency Mosaic Pathogenic Variants of NF1, TSC2, and AKT3 Genes from Blood in Patients with Neurodevelopmental Disorders |
Journal of Molecular Diagnostics
|
| 2023-07 |
Targeting Wnt/β-catenin-mediated upregulation of oncogenic NLGN3 suppresses cancer stem cells in glioblastoma |
Cell death & disease
|
| 2023-05 |
Genomic and transcriptomic profiling reveal molecular characteristics of parathyroid carcinoma |
EXPERIMENTAL AND MOLECULAR MEDICINE
|
| 2023-03 |
Human induced pluripotent stem cell line YCMi007-A generated from a dilated cardiomyopathy patient with a heterozygous dominant c.613C > T (p. Arg205Trp) variant of the TNNT2 gene |
STEM CELL RESEARCH
|
| 2022-10 |
Characterizing intrinsic molecular features of the immune subtypes of salivary mucoepidermoid carcinoma |
TRANSLATIONAL ONCOLOGY
|
| 2022-09 |
Analysis of low-level somatic mosaicism reveals stage and tissue-specific mutational features in human development |
PLoS genetics
|
| 2022-08 |
An induced pluripotent stem cell line (YCMi006-A) generated from a patient with hypertrophic cardiomyopathy who carries the ACTA1 mutation p.Ile343Met |
Stem Cell Research
|
| 2022-06 |
HLA-I-restricted CD8<sup>+</sup> T cell immunity may accelerate tumorigenesis in conjunction with VHL inactivation |
Iscience
|
| 2022-04 |
Tumor microenvironment-aware, single-transcriptome prediction of microsatellite instability in colorectal cancer using meta-analysis |
SCIENTIFIC REPORTS
|
| 2022-04 |
Insignificant effects of loss of heterozygosity in HLA in the efficacy of immune checkpoint blockade treatment |
GENES & GENOMICS
|
| 2022-04 |
Derivation of YCMi005-A, a human-induced pluripotent stem cell line, from a patient with dilated cardiomyopathy carrying missense variant in TPM1 (p. Glu192Lys) |
STEM CELL RESEARCH
|
| 2022-03 |
H-1 NMR based urinary metabolites profiling dataset of canine mammary tumors |
Scientific data
|
| 2022-03 |
Generation of a human induced pluripotent stem cell line YCMi004-A from a patient with dilated cardiomyopathy carrying a protein-truncating mutation of the Titin gene and its differentiation towards cardiomyocytes |
STEM CELL RESEARCH
|
| 2022-02 |
Establishment of reference standards for multifaceted mosaic variant analysis |
Scientific Data
|
| 2022-01 |
Genome-wide association study identifies TNFSF15 associated with childhood asthma |
ALLERGY
|
| 2021-12 |
Genomic and transcriptomic characterization of heterogeneous immune subgroups of microsatellite instability-high colorectal cancers |
Journal for ImmunoTherapy of Cancer
|
| 2021-10 |
Establishment of a novel human iPSC line (YCMi003-A) from a patient with dilated cardiomyopathy carrying genetic variant LMNA p.Asp364His. |
STEM CELL RESEARCH
|
| 2021-05 |
Comprehensive Analysis of Mutation-Based and Expressed Genes-Based Pathways in Head and Neck Squamous Cell Carcinoma |
PROCESSES
|
| 2021-04 |
Genomic landscape of extraordinary responses in metastatic breast cancer |
COMMUNICATIONS BIOLOGY
|
| 2021-03 |
Profiling of conditionally reprogrammed cell lines for in vitro chemotherapy response prediction of pancreatic cancer |
EBioMedicine
|
| 2021-02 |
Development of a program for in silico optimized selection of oligonucleotide-based molecular barcodes |
PLOS ONE
|
| 2020-11 |
An Improved, Assay Platform Agnostic, Absolute Single Sample Breast Cancer Subtype Classifier |
Cancers
|
| 2020-09 |
Wnt/β-catenin signaling pathway induces autophagy-mediated temozolomide-resistance in human glioblastoma |
CELL DEATH & DISEASE
|
| 2020-07 |
Cross-species oncogenic signatures of breast cancer in canine mammary tumors |
NATURE COMMUNICATIONS
|
| 2020-07 |
Prognostic value of cd200r1 mrna expression in head and neck squamous cell carcinoma |
Cancers
|
| 2020-05 |
Comparison of whole mitochondrial genome variants between hair shafts and reference samples using massively parallel sequencing |
INTERNATIONAL JOURNAL OF LEGAL MEDICINE
|
| 2020-04 |
Molecular subtypes of oropharyngeal cancer show distinct immune microenvironment related with immune checkpoint blockade response |
BRITISH JOURNAL OF CANCER
|
| 2019-11 |
Molecular characterization of lung adenocarcinoma from Korean patients using next generation sequencing |
PLOS ONE
|
| 2019-11 |
Impact of mouse contamination in genomic profiling of patient-derived models and best practice for robust analysis |
Genome Biology
|
| 2019-11 |
BAMixChecker: an automated checkup tool for matched sample pairs in NGS cohort |
BIOINFORMATICS
|
| 2019-08 |
Whole-exome and whole-transcriptome sequencing of canine mammary gland tumors |
Scientific Data
|
| 2019-07 |
Characteristic gene alterations in primary gastrointestinal T- and NK-cell lymphomas. |
LEUKEMIA
|
| 2019-04 |
A therapeutic strategy for chemotherapy-resistant gastric cancer via destabilization of both β-catenin and ras |
Cancers
|
| 2019-03 |
The use of technical replication for detection of low-level somatic mutations in next-generation sequencing |
NATURE COMMUNICATIONS
|
| 2019-01 |
Investigating the Feasibility of Targeted Next-Generation Sequencing to Guide the Treatment of Head and Neck Squamous Cell Carcinoma |
CANCER RESEARCH AND TREATMENT
|
| 2019-01 |
Molecular Diagnostic Assays and Clinicopathologic Implications of MET Exon 14 Skipping Mutation in Non–small-cell Lung Cancer |
CLINICAL LUNG CANCER
|
| 2018-12 |
Brain somatic mutations in SLC35A2 cause intractable epilepsy with aberrant N-glycosylation |
Neurology: Genetics
|
| 2018-04 |
Neopepsee: accurate genome-level prediction of neoantigens by harnessing sequence and amino acid immunogenicity information |
ANNALS OF ONCOLOGY
|
| 2018-04 |
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing |
BIOINFORMATICS
|
| 2018-03 |
Palmitate and minimally-modified low-density lipoprotein cooperatively promote inflammatory responses in macrophages. |
PLOS ONE
|
| 2018-03 |
Targeted gene panel and genotype-phenotype correlation in children with developmental and epileptic encephalopathy |
EPILEPSY RESEARCH
|
| 2018-02 |
Isoform specific gene expression analysis of KRAS in the prognosis of lung adenocarcinoma patients |
BMC BIOINFORMATICS
|
| 2017-12 |
Somatic mutation driven codon transition bias in human cancer |
SCIENTIFIC REPORTS
|
| 2017-11 |
Next-generation sequencing reveals novel resistance mechanisms and molecular heterogeneity in EGFR-mutant non-small cell lung cancer with acquired resistance to EGFR-TKIs |
LUNG CANCER
|
| 2017-05 |
In Silico Simulation of Signal Cascades in Biomedical Networks Based on the Production Rule System |
Lecture Notes in Computer Science
|
| 2017-03 |
Somatic Mutations in TSC1 and TSC2 Cause Focal Cortical Dysplasia |
AMERICAN JOURNAL OF HUMAN GENETICS
|
| 2016-10 |
Vecuum: identification and filtration of false somatic variants caused by recombinant vector contamination |
BIOINFORMATICS
|
| 2016-08 |
ISOexpresso: a web-based platform for isoform-level expression analysis in human cancer |
BMC GENOMICS
|
| 2016-04 |
Pilot Study of a Next-Generation Sequencing-Based Targeted Anticancer Therapy in Refractory Solid Tumors at a Korean Institution |
PLOS ONE
|
| 2016-03 |
Next-generation sequencing reveals somatic mutations that confer exceptional response to everolimus |
ONCOTARGET
|
| 2016-03 |
Establishment and characterisation of patient-derived xenografts as paraclinical models for gastric cancer |
SCIENTIFIC REPORTS
|
| 2016-01 |
Exome sequencing reveals recurrent REV3L mutations in cisplatin-resistant squamous cell carcinoma of head and neck |
SCIENTIFIC REPORTS
|
| 2015-12 |
Analysis of Whole Transcriptome Sequencing Data: Workflow and Software |
Genomics & Informatics
|
| 2015-12 |
An AKT3-FOXG1-reelin network underlies defective migration in human focal malformations of cortical development |
NATURE MEDICINE
|
| 2015-08 |
SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data |
BIOINFORMATICS
|
| 2015-05 |
Identification of genomic features in the classification of loss- and gain-of-function mutation |
BMC MEDICAL INFORMATICS AND DECISION MAKING
|
| 2015-05 |
Context-based resolution of semantic conflicts in biological pathways |
BMC MEDICAL INFORMATICS AND DECISION MAKING
|
| 2015-04 |
Brain somatic mutations in MTOR cause focal cortical dysplasia type II leading to intractable epilepsy |
NATURE MEDICINE
|
| 2014-09 |
A Systems Approach to Predict Oncometabolites via Context-Specific Genome-Scale Metabolic Networks |
PLOS COMPUTATIONAL BIOLOGY
|
| 2013-08 |
Virmid: accurate detection of somatic mutations with sample impurity inference |
GENOME BIOLOGY
|
| 2013-07 |
Reprever: resolving low-copy duplicated sequences using template driven assembly |
NUCLEIC ACIDS RESEARCH
|
| 2013-04 |
Evaluating genome architecture of a complex region via generalized bipartite matching |
BMC BIOINFORMATICS
|
| 2013-04 |
Wessim: a whole-exome sequencing simulator based on in silico exome capture |
BIOINFORMATICS
|
| 2012-08 |
De novo somatic mutations in components of the PI3K-AKT3-mTOR pathway cause hemimegalencephaly |
NATURE GENETICS
|
| 2011-12 |
Exploring molecular links between lymph node invasion and cancer prognosis in human breast cancer |
BMC SYSTEMS BIOLOGY
|
| 2011-01 |
Context-dependent transcriptional regulations between signal transduction pathways |
BMC BIOINFORMATICS
|
| 2009-03 |
Mining metastasis related genes by primary-secondary tumor comparisons from large-scale databases |
Bmc Bioinformatics
|
| 2008-08 |
Computational identification of significantly regulated metabolic reactions by integration of data on enzyme activity and gene expression |
BMB REPORTS
|
| 2007-11 |
BioCAD: an information fusion platform for bio-network inference and analysis |
BMC BIOINFORMATICS
|